Miyakogusa Predicted Gene

Lj0g3v0078139.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JJG3_SOYBN 187 92.7 95.8 (tr|I1JJG3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G07810.1 162 80.2 87.5 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495052 FORWARD LENGTH=494
Medicago Medtr3g055990.1 175 86.6 92.8 | heterogeneous nuclear ribonucleoprotein 27C, putative | HC | chr3:22254761-22250364 | 20130731
Soybean Glyma02g46650.1 187 92.7 95.8  
LJGI gnl|LJGI|TC58641 56.0 80.0 80.0 similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined scaffold_383, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_383, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0078139.1 length: 96 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 3.1e-05 1-37
ProfileScan PS50102 RRM 8.689 1-46
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 5.7e-09 1-51
no_ID  
HMMPanther PTHR24012 FAMILY 3.2e-37 1-95
HMMPanther PTHR24012:SF27 SUBFAMILY 3.2e-37 1-95
superfamily SSF54928 RNA-binding 3.7e-09 1-66
Wolf-PSORT
Lj0g3v0078139.1	cyto 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0078139.1