Miyakogusa Predicted Gene

Lj0g3v0077609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IPV3_MEDTR 159 65.3 79.0 (tr|G7IPV3) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_2g019350 PE=4 SV=1
TAIR_pep AT1G26900.1 120 48.4 67.5 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:9319756-9321474 REVERSE LENGTH=572
Medicago Medtr2g019350.1 160 65.3 79.0 | PPR containing plant-like protein | HC | chr2:6301271-6304315 | 20130731
Soybean Glyma15g10060.1 143 59.1 70.9  
LJGI gnl|LJGI|BP038410 686 98.9 98.9 weakly similar to UniRef100_A7QEG3 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0077609.1 length: 127 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 2.9e-09 74-121
HMMTigr TIGR00756 PPR: 2.7e-07 77-109
ProfileScan PS51375 PPR 5.886 75-109
44-74
no_ID  
HMMPanther PTHR24015 FAMILY 3.5e-30 1-121
HMMPanther PTHR24015:SF109SUBFAMILY NOT 3.5e-30 1-121
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
Wolf-PSORT
Lj0g3v0077609.1	chlo 6, E.R. 3, mito 2, extr 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0077609.1