Miyakogusa Predicted Gene

Lj0g3v0077349.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JHB5_SOYBN 1088 76.2 79.9 (tr|I1JHB5) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT5G58870.1 954 66.0 74.9 | Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-23773719 REVERSE LENGTH=806
Medicago Medtr5g069780.1 1061 73.4 79.2 | ATP-dependent zinc metalloprotease FTSH protein | HC | chr5:29599970-29607519 | 20130731
Soybean Glyma02g39040.1 1076 76.4 79.9  
LJGI gnl|LJGI|AW720015 1061 99.6 99.6 similar to UniRef100_A7NYK3 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0077349.1 length: 785 aa.
IPR000642 Peptidase M41
method AccNumber shortName E-value location
Molecular Function GO:0004222 metalloendopeptidase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006508 proteolysis    
HMMPfam PF01434 Peptidase_M41 2e-41 579-784
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.5e-22 376-516
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 2.8e-42 380-513
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 484-502
IPR005936 Peptidase, FtsH
Molecular Function GO:0004222 metalloendopeptidase activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0030163 protein catabolic process    
HAMAP MF_01458 FtsH 30.254 36-784
HMMTigr TIGR01241 FtsH_fam: 4.7e-164 298-784
IPR011546 Peptidase M41, FtsH extracellular
Molecular Function GO:0004222 metalloendopeptidase activity    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008270 zinc ion binding    
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF06480 FtsH_ext 9.7e-06 158-280
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 7.1e-68 333-588
no_ID  
Gene3D G3DSA:1.10.8.60 no description 1.3e-21 523-591
Gene3D G3DSA:3.40.50.300 no description 1.1e-57 337-522
HMMPanther PTHR23076 METALLOPROTEASE 0 106-785
HMMPanther PTHR23076:SF6 FTSH 0 106-785
Seg seg seg NA 104-121
129-143
149-167
223-235
554-567
663-674
superfamily SSF140990 FtsH 6.3e-37 597-785
Putative transmembrane regions
  From To
TM segments
SOSUI		 8 30
149 171
288 310
Wolf-PSORT
Lj0g3v0077349.1	cyto 6, plas 5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0077349.1