Miyakogusa Predicted Gene

Lj0g3v0076569.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KU82_SOYBN 1040 79.2 88.9 (tr|I1KU82) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G73710.1 743 56.4 75.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:27721190-27724165 FORWARD LENGTH=991
Medicago Medtr5g077220.1 924 72.1 84.1 | PPR containing plant-like protein | HC | chr5:32962861-32959451 | 20130731
Soybean Glyma08g18650.1 1014 78.9 88.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0076569.2 length: 640 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0005 11-41
326-353
361-390
395-425
430-457
534-561
HMMPfam PF13041 PPR_2 5e-09 47-91
188-230
257-301
HMMTigr TIGR00756 PPR: 2.5e-06 11-45
47-80
81-115
188-215
222-253
257-290
292-324
327-353
430-463
533-566
ProfileScan PS51375 PPR 6.380 9-43
44-78
79-113
184-218
148-183
114-144
219-253
254-288
289-323
324-354
393-427
359-389
428-462
531-565
566-600
601-631
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.2e-11 256-419
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-190 1-612
HMMPanther PTHR24015:SF81 SUBFAMILY 1.3e-190 1-612
Seg seg seg NA 20-29
superfamily SSF48452 TPR-like 0.00037 45-249
264-419
Wolf-PSORT
Lj0g3v0076569.2	cyto 6, extr 4, chlo 3, cyto_nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0076569.2