Miyakogusa Predicted Gene

Lj0g3v0076569.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KU82_SOYBN 1440 73.4 83.5 (tr|I1KU82) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G73710.1 1074 58.4 75.7 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:27721190-27724165 FORWARD LENGTH=991
Medicago Medtr5g077220.1 1322 68.1 78.7 | PPR containing plant-like protein | HC | chr5:32962861-32959451 | 20130731
Soybean Glyma08g18650.1 1377 75.9 86.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0076569.1 length: 999 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00084 176-205
653-680
688-717
722-752
757-784
861-888
HMMPfam PF13041 PPR_2 8.7e-09 304-344
370-418
515-557
584-628
HMMPfam PF13812 PPR_3 0.016 139-170
HMMTigr TIGR00756 PPR: 4.3e-06 176-209
304-336
338-372
374-407
408-442
515-542
549-580
584-617
619-651
654-680
757-790
860-893
ProfileScan PS51375 PPR 6.380 138-172
173-207
208-242
301-335
336-370
371-405
406-440
511-545
475-510
441-471
546-580
581-615
616-650
651-681
720-754
686-716
755-789
858-892
893-927
928-958
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9.9e-12 583-746
no_ID  
HMMPanther PTHR24015 FAMILY 1.1e-279 74-999
HMMPanther PTHR24015:SF81 SUBFAMILY 1.1e-279 74-999
Seg seg seg NA 10-26
60-75
347-356
superfamily SSF48452 TPR-like 0.00025 372-576
superfamily SSF81901 HCP-like 2.9e-05 295-682
Wolf-PSORT
Lj0g3v0076569.1	chlo 13.5, chlo_mito 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0076569.1