Miyakogusa Predicted Gene

Lj0g3v0076279.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L414_SOYBN 303 68.1 83.3 (tr|I1L414) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G12700.1 177 38.6 64.8 | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735
Medicago Medtr0014s0180.1 286 66.2 79.5 | pentatricopeptide (PPR) repeat protein | LC | scaffold0014:105937-104291 | 20130731
Soybean Glyma09g30160.1 303 68.1 83.3  
LJGI gnl|LJGI|FS341384 648 88.0 88.0 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0076279.1 length: 210 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 1.4e-08 109-140
HMMPfam PF13041 PPR_2 8.8e-19 46-91
148-196
HMMTigr TIGR00756 PPR: 0.00081 46-79
81-114
116-142
151-185
186-210
ProfileScan PS51375 PPR 9.416 9-43
44-78
79-113
114-148
149-183
184-210
no_ID  
HMMPanther PTHR24015 FAMILY 2.8e-59 1-210
HMMPanther PTHR24015:SF0 SUBFAMILY 2.8e-59 1-210
Wolf-PSORT
Lj0g3v0076279.1	chlo 11, mito 1.5, cyto_mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0076279.1