Miyakogusa Predicted Gene

Lj0g3v0074579.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep AT2G43160.4 54.3 86.2 89.7 | Symbols: | ENTH/VHS family protein | chr2:17948884-17952920 FORWARD LENGTH=646

Medicago Medtr7g006280.2 54.7 89.7 89.7 | ENTH/ANTH/VHS superfamily protein | HC | chr7:639194-631287 | 20130731

Soybean Glyma18g53750.1 56.6 93.1 93.1

LJGI gnl|LJGI|TC77041 143 95.5 95.5 homologue to UniRef100_A2Q4X4 Cluster: Epsin, N-terminal; ENTH/VHS; n=1; Medicago truncatula|Rep: Epsin, N-terminal; ENTH/VHS - Medicago truncatula (Barrel medic), partial (26%)

Putative transmembrane regions

From To

TM segments
SOSUI 30 51

Wolf-PSORT

Lj0g3v0074579.1 cyto_nucl 6.5, nucl 5, cyto 4, mito 2, chlo 1, extr 1, E.R. 1, cyto_mito 1, mito_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0074579.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	AT2G43160.4	54.3	86.2	89.7	\| Symbols: \| ENTH/VHS family protein \| chr2:17948884-17952920 FORWARD LENGTH=646
Medicago	Medtr7g006280.2	54.7	89.7	89.7	\| ENTH/ANTH/VHS superfamily protein \| HC \| chr7:639194-631287 \| 20130731
Soybean	Glyma18g53750.1	56.6	93.1	93.1
LJGI	gnl\|LJGI\|TC77041	143	95.5	95.5	homologue to UniRef100_A2Q4X4 Cluster: Epsin, N-terminal; ENTH/VHS; n=1; Medicago truncatula\|Rep: Epsin, N-terminal; ENTH/VHS - Medicago truncatula (Barrel medic), partial (26%)