Miyakogusa Predicted Gene

Lj0g3v0074399.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1MX69_SOYBN 1170 64.2 74.5 (tr|I1MX69) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT5G26160.1 495 36.0 52.2 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20610.1); Has 197 Blast hits to 158 proteins in 44 species: Archae - 0; Bacteria - 14; Metazoa - 28; Fungi - 15; Plants - 117; Viruses - 2; Other Eukaryotes - 21 (source: NCBI BLink). | chr5:9143269-9146312 FORWARD LENGTH=976

Medicago Medtr1g015120.1 985 55.0 64.6 | hypothetical protein | HC | chr1:3723601-3727194 | 20130731

Soybean Glyma14g11450.1 1152 65.1 75.3

LJGI gnl|LJGI|BW594887 932 100.0 100.0 weakly similar to UniRef100_A7P4P3 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0074399.1 length: 946 aa.

IPR019448 EEIG1/EHBP1 N-terminal domain

method AccNumber shortName E-value location

HMMPfam PF10358 NT-C2 2.6e-10 107-252

no_ID

Seg seg seg NA 12-25
252-272

Wolf-PSORT

Lj0g3v0074399.1 nucl 7, cyto 3, chlo 1, vacu 1, cysk 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0074399.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1MX69_SOYBN	1170	64.2	74.5	(tr\|I1MX69) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT5G26160.1	495	36.0	52.2	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20610.1); Has 197 Blast hits to 158 proteins in 44 species: Archae - 0; Bacteria - 14; Metazoa - 28; Fungi - 15; Plants - 117; Viruses - 2; Other Eukaryotes - 21 (source: NCBI BLink). \| chr5:9143269-9146312 FORWARD LENGTH=976
Medicago	Medtr1g015120.1	985	55.0	64.6	\| hypothetical protein \| HC \| chr1:3723601-3727194 \| 20130731
Soybean	Glyma14g11450.1	1152	65.1	75.3
LJGI	gnl\|LJGI\|BW594887	932	100.0	100.0	weakly similar to UniRef100_A7P4P3 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)

IPR019448	EEIG1/EHBP1 N-terminal domain
Lj0g3v0074399.1				length: 946 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF10358	NT-C2	2.6e-10	107-252
no_ID
Seg	seg	seg	NA	12-25 252-272