Miyakogusa Predicted Gene

Lj0g3v0074089.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LTQ5_SOYBN 363 83.7 87.9 (tr|I1LTQ5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G22770.2 306 69.2 81.3 | Symbols: alpha-ADR | alpha-adaptin | chr5:7579844-7588026 REVERSE LENGTH=1012
Medicago Medtr2g084610.1 341 79.6 84.3 | adaptor protein complex AP-2, alpha subunit | HC | chr2:35817582-35830646 | 20130731
Soybean Glyma12g30520.1 363 83.7 87.9  
LJGI gnl|LJGI|TC65218 1106 99.6 99.6 similar to UniRef100_Q8LPL6 Cluster: Alpha-adaptin; n=1; Arabidopsis thaliana|Rep: Alpha-adaptin - Arabidopsis thaliana (Mouse-ear cress), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0074089.1 length: 214 aa.
IPR003164 Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF02296 Alpha_adaptin_C 6.2e-19 58-165
IPR009028 Coatomer/calthrin adaptor appendage, C-terminal subdomain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030117 membrane coat    
superfamily SSF55711 Subdomain 4.7e-33 58-173
IPR013038 Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
Gene3D G3DSA:2.60.40.1030 no description 4.7e-10 2-58
IPR013041 Coatomer/clathrin adaptor appendage, Ig-like subdomain
superfamily SSF49348 Clathrin 3.9e-09 1-57
IPR015873 Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030117 membrane coat    
Gene3D G3DSA:3.30.310.30 no description 2.9e-25 59-173
no_ID  
HMMPanther PTHR22780 ADAPTIN, 1.4e-62 20-176
HMMPanther PTHR22780:SF9 ALPHA-ADAPTIN 1.4e-62 20-176
Seg seg seg NA 177-191
Wolf-PSORT
Lj0g3v0074089.1	cyto 7, chlo 3, pero 2, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0074089.1