Miyakogusa Predicted Gene
- Lj0g3v0073749.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MEC3_SOYBN |
427 |
73.1 |
84.6 |
(tr|K7MEC3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G09610.1 |
406 |
66.9 |
81.0 |
| Symbols: | Protein of unknown function (DUF579) | chr1:3111789-3112637 FORWARD LENGTH=282 |
| Medicago |
Medtr3g005710.1 |
373 |
59.5 |
76.3 |
| glucuronoxylan 4-O-methyltransferase | HC | chr3:333758-332402 | 20130731 |
| Soybean |
Glyma16g00330.1 |
429 |
73.1 |
84.6 |
|
| LJGI |
gnl|LJGI|AI967470 |
474 |
99.6 |
99.6 |
similar to UniRef100_A7QCA0 Cluster: Chromosome undetermined scaffold_77, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_77, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0073749.1 |
length: 284 aa. |
| IPR006514 |
Xylan biosynthesis protein IRX15/IRX15L |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMTigr |
TIGR01627 |
A_thal_3515: |
1.5e-92 |
61-282 |
| IPR021148 |
Putative polysaccharide biosynthesis protein |
| HMMPfam |
PF04669 |
Polysacc_synt_4 |
1.5e-70 |
84-268 |
| no_ID |
|
| HMMPanther |
PTHR31444 |
FAMILY |
6.5e-60 |
11-282 |
| HMMPanther |
PTHR31444:SF0 |
SUBFAMILY |
6.5e-60 |
11-282 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
10 |
32 |
- Wolf-PSORT
Lj0g3v0073749.1 cyto 4, extr 3, cyto_plas 3, mito 2, plas 2, vacu 2, cyto_pero 2, mito_plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0073749.1 |
|