Miyakogusa Predicted Gene

Lj0g3v0073339.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JUC8_SOYBN 850 72.7 85.1 (tr|I1JUC8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G25490.1 620 55.4 73.9 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 | chr2:10848018-10850275 REVERSE LENGTH=628
Medicago Medtr1g012520.1 782 67.4 81.1 | EIN3-binding F-box-like protein | HC | chr1:2502649-2506197 | 20130731
Soybean Glyma04g07110.1 850 72.7 85.1  
LJGI gnl|LJGI|TC65412 3017 99.4 99.4 similar to UniRef100_O22512 Cluster: Grr1; n=1; Glycine max|Rep: Grr1 - Glycine max (Soybean), partial (77%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0073339.1 length: 687 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00256 A 4.1e-06 114-155
superfamily SSF81383 F-box 3e-07 101-148
IPR006553 Leucine-rich repeat, cysteine-containing subtype
HMMSmart SM00367 Leucine-rich 11 233-258
259-284
285-310
311-335
390-415
416-441
442-467
496-521
522-547
549-574
576-601
602-626
628-653
no_ID  
Gene3D G3DSA:3.80.10.10 no description 5.5e-31 203-475
476-680
HMMPanther PTHR23125 F-BOX/LEUCINE 2.9e-152 106-686
HMMPanther PTHR23125:SF68 SUBFAMILY 2.9e-152 106-686
HMMPfam PF12937 F-box-like 2.9e-06 111-145
HMMPfam PF13516 LRR_6 0.0038 285-309
577-599
602-624
Seg seg seg NA 8-29
superfamily SSF52047 RNI-like 9.2e-29 219-460
391-686
Putative transmembrane regions
  From To
TM segments
SOSUI		 10 32
52 74
Wolf-PSORT
Lj0g3v0073339.1	vacu 6, plas 3, E.R._vacu 3, chlo 2, nucl_plas 2, golg_plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0073339.1