Miyakogusa Predicted Gene

Lj0g3v0073249.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL C6T977_SOYBN 474 84.7 89.4 (tr|C6T977) Uncharacterized protein OS=Glycine max PE=2 SV=1

TAIR_pep AT4G28390.1 416 74.4 81.5 | Symbols: AAC3, ATAAC3 | ADP/ATP carrier 3 | chr4:14041486-14042781 REVERSE LENGTH=379

Medicago Medtr4g078545.1 459 81.4 86.9 | ADP/ATP carrier protein | HC | chr4:30347981-30344743 | 20130731

Soybean Glyma06g44510.1 474 84.7 89.4

LJGI gnl|LJGI|TC64813 1631 100.0 100.0 homologue to UniRef100_A7PJ66 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (85%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0073249.1 length: 276 aa.

IPR002067 Mitochondrial carrier protein

method AccNumber shortName E-value location

Biological Process GO:0055085 transmembrane transport

FPrintScan PR00926 MITOCARRIER 9.1e-54 75-88
88-102
138-158
190-208
240-258

IPR002113 Adenine nucleotide translocator 1

Molecular Function GO:0005215 transporter activity

Cellular Component GO:0005743 mitochondrial inner membrane

Biological Process GO:0006810 transport

Biological Process GO:0055085 transmembrane transport

FPrintScan PR00927 ADPTRNSLCASE 7e-32 72-84
116-137
149-161
175-188

IPR018108 Mitochondrial substrate/solute carrier

HMMPfam PF00153 Mito_carr 1.2e-21 70-167
175-267

ProfileScan PS50920 SOLCAR 21.934 70-163
175-267

IPR023395 Mitochondrial carrier domain

Gene3D G3DSA:1.50.40.10 no description 3.5e-51 72-267

superfamily SSF103506 Mitochondrial 9.8e-47 67-269

no_ID

HMMPanther PTHR24089 FAMILY 3.1e-120 72-269

HMMPanther PTHR24089:SF31 SUBFAMILY 3.1e-120 72-269

Seg seg seg NA 181-193

Wolf-PSORT

Lj0g3v0073249.1 chlo 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0073249.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	C6T977_SOYBN	474	84.7	89.4	(tr\|C6T977) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep	AT4G28390.1	416	74.4	81.5	\| Symbols: AAC3, ATAAC3 \| ADP/ATP carrier 3 \| chr4:14041486-14042781 REVERSE LENGTH=379
Medicago	Medtr4g078545.1	459	81.4	86.9	\| ADP/ATP carrier protein \| HC \| chr4:30347981-30344743 \| 20130731
Soybean	Glyma06g44510.1	474	84.7	89.4
LJGI	gnl\|LJGI\|TC64813	1631	100.0	100.0	homologue to UniRef100_A7PJ66 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (85%)

IPR002067	Mitochondrial carrier protein
Lj0g3v0073249.1				length: 276 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0055085	transmembrane transport
FPrintScan	PR00926	MITOCARRIER	9.1e-54	75-88 88-102 138-158 190-208 240-258
IPR002113	Adenine nucleotide translocator 1
Molecular Function	GO:0005215	transporter activity
Cellular Component	GO:0005743	mitochondrial inner membrane
Biological Process	GO:0006810	transport
Biological Process	GO:0055085	transmembrane transport
FPrintScan	PR00927	ADPTRNSLCASE	7e-32	72-84 116-137 149-161 175-188
IPR018108	Mitochondrial substrate/solute carrier
HMMPfam	PF00153	Mito_carr	1.2e-21	70-167 175-267
ProfileScan	PS50920	SOLCAR	21.934	70-163 175-267
IPR023395	Mitochondrial carrier domain
Gene3D	G3DSA:1.50.40.10	no description	3.5e-51	72-267
superfamily	SSF103506	Mitochondrial	9.8e-47	67-269
no_ID
HMMPanther	PTHR24089	FAMILY	3.1e-120	72-269
HMMPanther	PTHR24089:SF31	SUBFAMILY	3.1e-120	72-269
Seg	seg	seg	NA	181-193