| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1LLV5_SOYBN | 469 | 63.8 | 73.1 | (tr|I1LLV5) Structure-specific endonuclease subunit SLX1 homolog OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT2G30350.2 | 266 | 43.2 | 55.5 | | Symbols: | Excinuclease ABC, C subunit, N-terminal | chr2:12934237-12935742 REVERSE LENGTH=368 |
| Medicago | Medtr3g466410.1 | 467 | 66.0 | 72.6 | | endo/excinuclease amino terminal domain protein | HC | chr3:27284013-27280966 | 20130731 |
| Soybean | Glyma11g30050.1 | 469 | 63.8 | 73.1 | |
| LJGI | gnl|LJGI|BP035112 | 543 | 99.6 | 99.6 | similar to UniRef100_Q01AB4 Cluster: Chromosome 04 contig 1, DNA sequence; n=1; Ostreococcus tauri|Rep: Chromosome 04 contig 1, DNA sequence - Ostreococcus tauri, partial (4%) |
| Lj0g3v0072759.1 | length: 401 aa. | |||
| IPR000305 | GIY-YIG nuclease superfamily | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01541 | GIY-YIG | 9.1e-07 | 55-112 |
| HMMSmart | SM00465 | GIY-YIG | 0.0056 | 40-136 |
| IPR027299 | GIY-YIG domain | |||
| ProfileScan | PS50164 | GIY_YIG | 18.092 | 39-127 |
| IPR027520 | Structure-specific endonuclease subunit Slx1 | |||
| Biological Process | GO:0006281 | DNA repair | ||
| Molecular Function | GO:0017108 | 5'-flap endonuclease activity | ||
| Cellular Component | GO:0033557 | Slx1-Slx4 complex | ||
| HAMAP | MF_03100 | Endonuc_su_Slx1 | 21.252 | 36-386 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 4-25 |
| HMMPanther | PTHR20208 | FAMILY | 1.2e-71 | 26-187 |
| Seg | seg | seg | NA | 10-39 301-314 376-385 |
Lj0g3v0072759.1 nucl 8, chlo 2, cyto 1, mito 1, cysk 1, golg_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0072759.1 |