Miyakogusa Predicted Gene

Lj0g3v0072499.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JCY0_MEDTR 588 83.2 88.7 (tr|G7JCY0) Solute carrier family 35 member C2 OS=Medicago truncatula GN=MTR_4g114360 PE=4 SV=1
TAIR_pep AT2G25520.1 522 74.3 83.4 | Symbols: | Drug/metabolite transporter superfamily protein | chr2:10860950-10861993 FORWARD LENGTH=347
Medicago Medtr4g114360.1 588 83.2 88.7 | nucleotide/sugar transporter family protein | HC | chr4:47014899-47013293 | 20130731
Soybean Glyma17g12410.1 585 82.3 88.1  
LJGI gnl|LJGI|TC73452 1197 99.5 99.5 similar to UniRef100_A7PF27 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0072499.1 length: 345 aa.
IPR000620 Drug/metabolite transporter
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
HMMPfam PF00892 EamA 2.5e-05 34-152
IPR004853 Domain of unknown function DUF250
HMMPfam PF03151 TPT 5.8e-33 163-302
no_ID  
Coil coil coiled-coil NA 311-332
HMMPanther PTHR11132 SOLUTE 2.8e-97 7-333
HMMPanther PTHR11132:SF14 SUBFAMILY 2.8e-97 7-333
Seg seg seg NA 241-252
305-325
superfamily SSF103481 Multidrug 1.5e-05 56-157
Putative transmembrane regions
  From To
TM segments
SOSUI		 12 34
49 71
78 99
107 129
132 153
168 190
198 220
230 252
258 280
282 304
Wolf-PSORT
Lj0g3v0072499.1	plas 7, chlo 3, E.R._vacu 2, vacu 1.5, E.R. 1.5, chlo_mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0072499.1