Miyakogusa Predicted Gene

Lj0g3v0072079.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KHS0_SOYBN 340 79.1 86.0 (tr|I1KHS0) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G46680.1 208 52.4 66.5 | Symbols: ATHB-7, ATHB7, HB-7 | homeobox 7 | chr2:19165777-19166773 REVERSE LENGTH=258
Medicago Medtr8g026960.1 330 77.9 88.5 | homeobox associated leucine zipper protein | HC | chr8:9378853-9379840 | 20130731
Soybean Glyma07g05800.1 340 79.1 86.0  
LJGI gnl|LJGI|TC73395 1078 98.6 98.6 similar to UniRef100_A7PXQ8 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0072079.1 length: 246 aa.
IPR000047 Helix-turn-helix motif
method AccNumber shortName E-value location
Molecular Function GO:0000976 transcription regulatory region sequence-specific DNA binding    
FPrintScan PR00031 HTHREPRESSR 1e-05 64-73
73-89
IPR001356 Homeodomain
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 3e-16 40-91
HMMSmart SM00389 Homeodomain 7.8e-16 31-97
ProfileScan PS50071 HOMEOBOX_2 17.864 33-93
IPR003106 Leucine zipper, homeobox-associated
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02183 HALZ 5.9e-12 93-135
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 9.7e-19 40-101
superfamily SSF46689 Homeodomain-like 6.8e-19 9-96
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 68-91
no_ID  
Coil coil coiled-coil NA 92-134
HMMPanther PTHR24326 FAMILY 3.6e-47 1-137
HMMPanther PTHR24326:SF64 SUBFAMILY 3.6e-47 1-137
Seg seg seg NA 6-26
Wolf-PSORT
Lj0g3v0072079.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0072079.1