Miyakogusa Predicted Gene

Lj0g3v0071689.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KVL2_SOYBN 526 71.4 79.7 (tr|K7KVL2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G48440.1 379 56.1 73.0 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr3:17941402-17943576 FORWARD LENGTH=448
Medicago Medtr3g075190.1 503 59.9 69.3 | zinc finger CCCH domain protein | HC | chr3:34208143-34204008 | 20130731
Soybean Glyma17g13580.1 498 70.5 80.8  
LJGI gnl|LJGI|FS321566 1047 99.6 99.6 homologue to UniRef100_Q5TND5 Cluster: AGAP009261-PA; n=1; Anopheles gambiae str. PEST|Rep: AGAP009261-PA - Anopheles gambiae str., partial (1%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0071689.1 length: 694 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 8.8e-05 414-437
HMMPfam PF00642 zf-CCCH 6.7e-08 366-388
411-433
457-480
596-617
639-663
HMMSmart SM00356 zinc 0.00014 362-389
408-435
454-481
590-617
636-663
ProfileScan PS50103 ZF_C3H1 14.098 362-390
408-436
454-482
590-618
636-664
no_ID  
HMMPanther PTHR12506 PROTEIN 2.3e-118 355-671
HMMPanther PTHR12506:SF11 ZINC 2.3e-118 355-671
Seg seg seg NA 498-511
677-686
superfamily SSF90229 CCCH 5.9e-05 357-396
449-482
403-442
585-624
631-670
Wolf-PSORT
Lj0g3v0071689.1	nucl 13.5, cyto_nucl 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0071689.1