Miyakogusa Predicted Gene

Lj0g3v0071519.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7LIU0_SOYBN 231 40.8 52.1 (tr|K7LIU0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G12560.2 78.2 26.1 40.9 | Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413
Medicago Medtr3g103020.1 185 35.7 48.3 | galactose oxidase | HC | chr3:47452814-47451137 | 20130731
Soybean Glyma08g27950.1 224 39.7 48.3  
LJGI gnl|LJGI|FS325267 347 84.5 84.5  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0071519.2 length: 433 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2e-08 29-65
HMMSmart SM00256 A 8.4e-10 29-69
ProfileScan PS50181 FBOX 11.485 23-69
superfamily SSF81383 F-box 2.2e-18 29-165
IPR006527 F-box associated domain, type 1
HMMPfam PF07734 FBA_1 1.2e-05 190-283
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 1e-11 185-283
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 5.9e-10 28-65
HMMPanther PTHR32133 FAMILY 1.2e-15 27-177
HMMPanther PTHR32133:SF0 SUBFAMILY 1.2e-15 27-177
Seg seg seg NA 14-26
299-310
357-372
378-432
Wolf-PSORT
Lj0g3v0071519.2	nucl 6, cyto 6, cyto_nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0071519.2