Miyakogusa Predicted Gene

Lj0g3v0071309.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LYQ2_SOYBN 585 78.2 84.5 (tr|I1LYQ2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G04130.1 466 62.1 74.7 | Symbols: TPR2, AtTPR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1073465-1075374 FORWARD LENGTH=360
Medicago Medtr1g084100.1 65.5 36.7 57.8 | TPR domain protein | HC | chr1:37523477-37517409 | 20130731
Soybean Glyma13g18990.1 591 79.7 86.1  
LJGI gnl|LJGI|TC61082 2145 99.9 99.9 similar to UniRef100_A7Q1I4 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0071309.1 length: 360 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 6.9e-24 23-180
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 14.886 31-138
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.06 106-138
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.16 31-66
71-104
105-138
no_ID  
Coil coil coiled-coil NA 155-176
HMMPanther PTHR22904 TPR 3.3e-77 28-263
HMMPanther PTHR22904:SF151SET DOMAIN-CONTAINING 3.3e-77 28-263
HMMPfam PF13414 TPR_11 6.2e-14 30-102
Seg seg seg NA 156-171
superfamily SSF48452 TPR-like 8.1e-22 22-181
Wolf-PSORT
Lj0g3v0071309.1	nucl 4, cyto 4, cyto_nucl 4, chlo 3, cysk_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0071309.1