Miyakogusa Predicted Gene

Lj0g3v0070649.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KXI8_SOYBN 375 65.4 69.9 (tr|I1KXI8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G23980.1 236 48.3 58.1 | Symbols: | RING/U-box superfamily protein | chr1:8484879-8485988 REVERSE LENGTH=369
Medicago Medtr8g063660.1 368 63.7 71.4 | RING-H2 finger protein ATL47 | HC | chr8:26668874-26670473 | 20130731
Soybean Glyma08g39940.1 375 65.4 69.9  
LJGI gnl|LJGI|TC63161 161 79.8 79.8 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (60%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0070649.1 length: 349 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 2.7e-15 98-142
HMMSmart SM00184 Ring 4.3e-07 99-140
ProfileScan PS50089 ZF_RING_2 12.563 99-141
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.9e-18 97-144
no_ID  
HMMPanther PTHR14155 RING 3.4e-52 1-168
HMMPanther PTHR14155:SF23 OS01G0736600 3.4e-52 1-168
Seg seg seg NA 4-22
163-191
231-237
superfamily SSF57850 RING/U-box 6.7e-23 70-147
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
Wolf-PSORT
Lj0g3v0070649.1	chlo 12, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0070649.1