Miyakogusa Predicted Gene

Lj0g3v0070249.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K6W1_SOYBN 1669 80.8 88.7 (tr|K7K6W1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G13650.1 1253 59.5 75.7 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Medicago Medtr6g032915.1 1610 78.9 87.9 | pentatricopeptide (PPR) repeat protein | HC | chr6:10235820-10240817 | 20130731
Soybean Glyma16g26880.1 1227 67.1 74.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0070249.1 length: 989 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0013 51-71
250-277
454-475
555-576
656-681
HMMPfam PF13041 PPR_2 2.2e-10 177-223
278-325
379-425
480-527
580-626
681-729
HMMTigr TIGR00756 PPR: 3.1e-06 179-212
249-277
280-314
381-414
482-515
583-616
684-715
ProfileScan PS51375 PPR 6.369 9-43
44-78
110-145
177-211
146-176
278-312
247-277
212-246
313-347
379-413
348-378
480-514
449-479
414-448
581-615
550-580
616-650
682-716
651-681
717-751
753-783
819-853
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.4e-09 679-680
no_ID  
HMMPanther PTHR24015 FAMILY 0 131-989
HMMPanther PTHR24015:SF99 SUBFAMILY 0 131-989
HMMPfam PF14432 DYW_deaminase 1.7e-13 867-979
Seg seg seg NA 622-633
763-772
Wolf-PSORT
Lj0g3v0070249.1	nucl 12, chlo 1, cyto 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0070249.1