Miyakogusa Predicted Gene

Lj0g3v0069809.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KV90_SOYBN 752 84.1 90.7 (tr|K7KV90) DNA topoisomerase OS=Glycine max PE=3 SV=1
TAIR_pep AT5G63920.1 655 73.8 82.7 | Symbols: TOP3A, AtTOP3alpha | topoisomerase 3alpha | chr5:25574533-25581230 FORWARD LENGTH=926
Medicago Medtr3g096640.1 721 81.2 87.9 | DNA topoisomerase | HC | chr3:44222682-44208485 | 20130731
Soybean Glyma06g16200.1 417 87.6 93.8  
LJGI gnl|LJGI|BP039068 468 99.6 99.6 similar to UniRef100_A7QSU2 Cluster: DNA topoisomerase; n=1; Vitis vinifera|Rep: DNA topoisomerase - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0069809.1 length: 452 aa.
IPR000380 DNA topoisomerase, type IA
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003917 DNA topoisomerase type I activity    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0006265 DNA topological change    
FPrintScan PR00417 PRTPISMRASEI 2.5e-08 21-30
103-119
201-215
HMMPanther PTHR11390 PROKARYOTIC 3.3e-154 12-421
IPR003602 DNA topoisomerase, type IA, DNA-binding
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003916 DNA topoisomerase activity    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0006265 DNA topological change    
HMMSmart SM00437 Bacterial 1.5e-55 1-239
IPR013497 DNA topoisomerase, type IA, central
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003916 DNA topoisomerase activity    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0006265 DNA topological change    
HMMPfam PF01131 Topoisom_bac 1.7e-59 10-278
IPR013498 DNA topoisomerase, type IA, zn finger
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003916 DNA topoisomerase activity    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0006265 DNA topological change    
HMMPfam PF01396 zf-C4_Topoisom 2e-07 326-363
IPR013824 DNA topoisomerase, type IA, central region, subdomain 1
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003916 DNA topoisomerase activity    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0006265 DNA topological change    
Gene3D G3DSA:1.10.460.10 no description 1.3e-29 126-287
IPR013826 DNA topoisomerase, type IA, central region, subdomain 3
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003916 DNA topoisomerase activity    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0006265 DNA topological change    
Gene3D G3DSA:1.10.290.10 no description 9.3e-20 10-116
IPR023405 DNA topoisomerase, type IA, core domain
superfamily SSF56712 Prokaryotic 2.1e-69 10-339
IPR023406 DNA topoisomerase, type IA, active site
Molecular Function GO:0003917 DNA topoisomerase type I activity    
PatternScan PS00396 TOPOISOMERASE_I_PROK NA 16-30
no_ID  
Gene3D G3DSA:3.30.65.10 no description 0.00063 328-359
HMMPanther PTHR11390:SF17 SUBFAMILY 3.3e-154 12-421
Wolf-PSORT
Lj0g3v0069809.1	cyto 10, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0069809.1