Miyakogusa Predicted Gene
- Lj0g3v0068109.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JB43_SOYBN |
195 |
86.0 |
94.4 |
(tr|I1JB43) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G35970.1 |
163 |
67.3 |
85.5 |
| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:14119060-14123078 REVERSE LENGTH=961 |
| Medicago |
Medtr1g040155.1 |
182 |
79.4 |
89.7 |
| DNA-binding protein SMUBP-2 | HC | chr1:14742280-14736383 | 20130731 |
| Soybean |
Glyma02g00330.1 |
195 |
86.0 |
94.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0068109.1 |
length: 120 aa. |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF52540 |
P-loop |
8.1e-12 |
50-110 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
1.4e-12 |
46-109 |
| HMMPanther |
PTHR10887 |
DNA2/NAM7 |
2.8e-24 |
1-107 |
| HMMPanther |
PTHR10887:SF140SUBFAMILY |
NOT |
2.8e-24 |
1-107 |
| HMMPfam |
PF13245 |
AAA_19 |
1.6e-09 |
66-107 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
98 |
119 |
- Wolf-PSORT
Lj0g3v0068109.1 chlo 5, mito 4, nucl 2, cyto_mito 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0068109.1 |
|