Miyakogusa Predicted Gene

Lj0g3v0067539.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KNM6_MEDTR 345 65.4 75.2 (tr|G7KNM6) Short-chain alcohol dehydrogenase OS=Medicago truncatula GN=MTR_6g023590 PE=3 SV=1
TAIR_pep AT2G47140.1 201 43.2 62.4 | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:19350970-19352059 REVERSE LENGTH=257
Medicago Medtr6g023590.1 345 65.4 75.2 | short-chain alcohol dehydrogenase | HC | chr6:8257715-8256601 | 20130731
Soybean Glyma04g00460.1 326 67.3 74.5  
LJGI gnl|LJGI|TC63997 117 79.4 79.4 similar to UniRef100_A7QI42 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0067539.1 length: 253 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00080 SDRFAMILY 4.5e-06 76-87
132-140
152-171
IPR002347 Glucose/ribitol dehydrogenase
FPrintScan PR00081 GDHRDH 1.6e-32 18-35
76-87
126-142
152-171
173-190
211-231
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 3.4e-47 8-40
61-247
IPR020904 Short-chain dehydrogenase/reductase, conserved site
Molecular Function GO:0016491 oxidoreductase activity    
PatternScan PS00061 ADH_SHORT NA 139-167
no_ID  
Coil coil coiled-coil NA 62-71
HMMPanther PTHR24322 FAMILY 8.5e-32 7-246
HMMPfam PF13561 adh_short_C2 8.7e-19 61-247
Seg seg seg NA 40-59
superfamily SSF51735 NAD(P)-binding 1.3e-52 12-246
Wolf-PSORT
Lj0g3v0067539.1	cyto 11, chlo 1, nucl 1, mito 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0067539.1