Miyakogusa Predicted Gene

Lj0g3v0067129.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KK74_SOYBN 1200 76.6 88.1 (tr|K7KK74) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G30825.1 1001 63.2 81.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:15009605-15012319 FORWARD LENGTH=904
Medicago Medtr2g058580.1 1132 74.4 85.9 | PPR containing plant-like protein | HC | chr2:24208300-24211066 | 20130731
Soybean Glyma04g24360.1 1200 76.6 88.1  
LJGI gnl|LJGI|BF177625 535 100.0 100.0 similar to UniRef100_A7QUY5 Cluster: Chromosome chr16 scaffold_182, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_182, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0067129.1 length: 744 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00045 13-39
49-78
84-113
120-147
330-352
403-429
574-604
HMMPfam PF13041 PPR_2 5.2e-13 185-234
507-549
610-651
676-724
HMMPfam PF13812 PPR_3 0.2 434-462
HMMTigr TIGR00756 PPR: 2.3e-10 13-40
49-82
120-150
156-185
188-218
435-468
506-539
540-571
574-607
610-642
644-677
680-712
ProfileScan PS51375 PPR 6.807 10-40
46-80
115-149
81-111
185-219
150-184
223-257
258-292
362-396
327-357
397-431
432-462
503-537
572-606
538-568
607-641
642-676
677-711
712-744
IPR004575 Cdk-activating kinase assembly factor MAT1/Tfb3
Cellular Component GO:0005634 nucleus    
Biological Process GO:0007049 cell cycle    
HMMPanther PTHR12683 FAMILY 0 1-744
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.3e-06 700-701
no_ID  
HMMPanther PTHR12683:SF10 PREDICTED 0 1-744
Wolf-PSORT
Lj0g3v0067129.1	chlo 7, cyto 5, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0067129.1