Miyakogusa Predicted Gene

Lj0g3v0066839.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JLP8_SOYBN 511 66.6 72.2 (tr|I1JLP8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G29050.1 374 52.0 65.4 | Symbols: ATRBL1, RBL1 | RHOMBOID-like 1 | chr2:12478245-12480121 FORWARD LENGTH=389
Medicago Medtr4g021755.1 424 61.7 68.3 | inactive rhomboid-like protein | HC | chr4:7215110-7210484 | 20130731
Soybean Glyma03g13780.1 511 66.6 72.2  
LJGI gnl|LJGI|TC77611 2294 100.0 100.0 similar to UniRef100_A7PNN3 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0066839.1 length: 388 aa.
IPR002610 Peptidase S54, rhomboid
method AccNumber shortName E-value location
Molecular Function GO:0004252 serine-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR22936 RHOMBOID-RELATED 6.1e-108 43-375
IPR022764 Peptidase S54, rhomboid domain
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 3.1e-54 108-262
HMMPfam PF01694 Rhomboid 4.3e-46 123-266
no_ID  
HMMPanther PTHR22936:SF0 SUBFAMILY 6.1e-108 43-375
Seg seg seg NA 58-71
193-207
249-262
294-315
superfamily SSF144091 Rhomboid-like 5.2e-39 50-268
Putative transmembrane regions
  From To
TM segments
SOSUI		 61 83
131 153
162 184
188 210
220 242
246 268
293 315
Wolf-PSORT
Lj0g3v0066839.1	nucl 6, plas 2.5, chlo 2, mito 2, chlo_mito 2, golg_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0066839.1