Miyakogusa Predicted Gene
- Lj0g3v0065939.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S7K3_LOTJA |
267 |
89.2 |
89.2 |
(tr|I3S7K3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G70600.1 |
223 |
73.6 |
82.4 |
| Symbols: | Ribosomal protein L18e/L15 superfamily protein | chr1:26621168-26621608 REVERSE LENGTH=146 |
| Medicago |
Medtr8g069460.1 |
239 |
77.7 |
83.1 |
| 60S ribosomal protein L27a-3 | HC | chr8:29101416-29102234 | 20130731 |
| Soybean |
Glyma01g03180.2 |
243 |
78.4 |
87.2 |
|
| LJGI |
gnl|LJGI|TC63348 |
886 |
100.0 |
100.0 |
similar to UniRef100_O82529 Cluster: Ribosomal protein L27a; n=1; Petunia x hybrida|Rep: Ribosomal protein L27a - Petunia hybrida (Petunia), partial (97%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0065939.1 |
length: 148 aa. |
| IPR001196 |
Ribosomal protein L15, conserved site |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003735 |
structural constituent of ribosome |
|
|
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Cellular Component |
GO:0005840 |
ribosome |
|
|
| Biological Process |
GO:0006412 |
translation |
|
|
| PatternScan |
PS00475 |
RIBOSOMAL_L15 |
NA |
109-141 |
| IPR021131 |
Ribosomal protein L18e/L15P |
| HMMPfam |
PF00828 |
Ribosomal_L18e |
1.1e-33 |
20-146 |
| superfamily |
SSF52080 |
Ribosomal |
1.7e-37 |
5-147 |
| no_ID |
|
| Gene3D |
G3DSA:3.100.10.10 |
no description |
5.8e-13 |
26-146 |
| HMMPanther |
PTHR11721 |
60S |
5.7e-103 |
2-148 |
| Seg |
seg |
seg |
NA |
125-140 |
- Wolf-PSORT
Lj0g3v0065939.1 cyto 6, nucl 4, mito 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0065939.1 |
|