Miyakogusa Predicted Gene

Lj0g3v0065809.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T8B7_LOTJA 277 88.3 90.9 (tr|I3T8B7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G53850.1 208 65.4 77.1 | Symbols: | Uncharacterised protein family (UPF0497) | chr3:19948262-19948994 REVERSE LENGTH=154
Medicago Medtr4g021340.1 241 75.2 85.0 | CASP-like protein | HC | chr4:6920412-6915192 | 20130731
Soybean Glyma01g24900.1 241 77.1 83.0  
LJGI gnl|LJGI|TC71464 737 94.6 94.6 similar to UniRef100_A7PNT0 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0065809.1 length: 154 aa.
IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
method AccNumber shortName E-value location
HMMPfam PF04535 DUF588 1.8e-28 8-139
no_ID  
HMMPanther PTHR32021 FAMILY 3.5e-82 2-154
HMMPanther PTHR32021:SF0 SUBFAMILY 3.5e-82 2-154
Seg seg seg NA 90-102
Putative transmembrane regions
  From To
TM segments
SOSUI		 17 39
46 68
82 104
129 151
Wolf-PSORT
Lj0g3v0065809.1	chlo 10, extr 2, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0065809.1