Miyakogusa Predicted Gene
- Lj0g3v0065099.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q45FY8_SOYBN |
787 |
81.5 |
87.8 |
(tr|Q45FY8) Coronatine-insensitive 1 OS=Glycine max GN=COI1 PE=2 SV=1 |
| TAIR_pep |
AT2G39940.1 |
609 |
64.2 |
77.7 |
| Symbols: COI1 | RNI-like superfamily protein | chr2:16672848-16675486 REVERSE LENGTH=592 |
| Medicago |
Medtr3g070140.1 |
717 |
75.9 |
85.0 |
| coronatine-insensitive protein | HC | chr3:31410162-31406539 | 20130731 |
| Soybean |
Glyma11g34940.1 |
787 |
81.5 |
87.8 |
|
| LJGI |
gnl|LJGI|TC69095 |
1132 |
99.5 |
99.5 |
similar to UniRef100_Q45FY8 Cluster: Coronatine-insensitive 1; n=1; Glycine max|Rep: Coronatine-insensitive 1 - Glycine max (Soybean), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0065099.1 |
length: 477 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
3e-28 |
17-404 |
| HMMPanther |
PTHR23125 |
F-BOX/LEUCINE |
8.8e-223 |
19-477 |
| HMMPanther |
PTHR23125:SF94 |
SUBFAMILY |
8.8e-223 |
19-477 |
| Seg |
seg |
seg |
NA |
292-309 |
| superfamily |
SSF52047 |
RNI-like |
2.3e-19 |
114-464 |
- Wolf-PSORT
Lj0g3v0065099.1 cyto 10, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0065099.1 |
|