Miyakogusa Predicted Gene

Lj0g3v0065089.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LC39_SOYBN 962 90.8 95.0 (tr|I1LC39) 3-ketoacyl-CoA synthase OS=Glycine max PE=3 SV=2
TAIR_pep AT2G26640.1 810 75.8 86.2 | Symbols: KCS11 | 3-ketoacyl-CoA synthase 11 | chr2:11330094-11331623 FORWARD LENGTH=509
Medicago Medtr1g076430.1 946 88.6 95.0 | 3-ketoacyl-CoA synthase-like protein | HC | chr1:34051152-34053887 | 20130731
Soybean Glyma10g32260.1 963 90.8 95.0  
LJGI gnl|LJGI|TC78922 1140 100.0 100.0 similar to UniRef100_A9XUG6 Cluster: Beta-ketoacyl-CoA synthase; n=1; Gossypium hirsutum|Rep: Beta-ketoacyl-CoA synthase - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0065089.1 length: 509 aa.
IPR012392 Very-long-chain 3-ketoacyl-CoA synthase
method AccNumber shortName E-value location
Biological Process GO:0006633 fatty acid biosynthetic process    
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPIR PIRSF036417 Very-long-chain 0 2-508
IPR013601 FAE1/Type III polyketide synthase-like protein
Biological Process GO:0006633 fatty acid biosynthetic process    
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPfam PF08392 FAE1_CUT1_RppA 1.8e-145 90-379
IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal
Biological Process GO:0008610 lipid biosynthetic process    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPfam PF08541 ACP_syn_III_C 1.6e-10 396-476
IPR016038 Thiolase-like, subgroup
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.47.10 no description 1.6e-56 90-296
306-479
IPR016039 Thiolase-like
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF53901 Thiolase-like 2.4e-38 82-303
305-481
no_ID  
HMMPanther PTHR31561 FAMILY 0 1-507
Putative transmembrane regions
  From To
TM segments
SOSUI		 30 52
70 92
Wolf-PSORT
Lj0g3v0065089.1	plas 7, vacu 3, E.R. 2, cyto 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0065089.1