Miyakogusa Predicted Gene

Lj0g3v0064839.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MBB4_SOYBN 634 51.4 60.5 (tr|I1MBB4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G55980.1 438 43.6 57.5 | Symbols: SZF1, ATSZF1 | salt-inducible zinc finger 1 | chr3:20776857-20778599 FORWARD LENGTH=580
Medicago Medtr5g071070.1 569 48.3 57.5 | ARM repeat CCCH-type zinc finger protein | HC | chr5:30120798-30124106 | 20130731
Soybean Glyma14g37330.1 634 51.4 60.5  
LJGI gnl|LJGI|TC62722 252 83.0 83.0 similar to UniRef100_Q0GIK4 Cluster: Cys-3-His zinc finger protein; n=1; Capsicum annuum|Rep: Cys-3-His zinc finger protein - Capsicum annuum (Bell pepper), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0064839.1 length: 538 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00356 zinc 16 242-268
277-300
ProfileScan PS50103 ZF_C3H1 7.301 247-269
277-301
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 0.0017 66-96
101-133
ProfileScan PS50088 ANK_REPEAT 11.033 101-136
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 4e-16 19-165
HMMPfam PF12796 Ank_2 1.8e-09 28-135
ProfileScan PS50297 ANK_REP_REGION 13.390 66-161
superfamily SSF48403 Ankyrin 8.8e-14 23-144
no_ID  
HMMPanther PTHR14493 UNCHARACTERIZED 5.2e-151 24-538
HMMPanther PTHR14493:SF20 CZF1/ZFAR1, 5.2e-151 24-538
Seg seg seg NA 320-333
superfamily SSF90229 CCCH 0.0066 237-270
275-306
Wolf-PSORT
Lj0g3v0064839.1	nucl 7, cyto 5, chlo 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0064839.1