Miyakogusa Predicted Gene
- Lj0g3v0064449.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L208_SOYBN |
605 |
75.8 |
82.8 |
(tr|K7L208) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G14590.1 |
447 |
68.7 |
82.5 |
| Symbols: | Nucleotide-diphospho-sugar transferase family protein | chr1:4998957-5000617 REVERSE LENGTH=386 |
| Medicago |
Medtr0223s0010.1 |
605 |
76.6 |
84.0 |
| nucleotide-diphospho-sugar transferase family protein | HC | scaffold0223:11789-7445 | 20130731 |
| Soybean |
Glyma20g00870.1 |
561 |
82.8 |
91.5 |
|
| LJGI |
gnl|LJGI|TC60936 |
1608 |
99.8 |
99.8 |
similar to UniRef100_A7QBW0 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0064449.2 |
length: 383 aa. |
| IPR005069 |
Nucleotide-diphospho-sugar transferase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03407 |
Nucleotid_trans |
1.4e-61 |
136-334 |
| no_ID |
|
| HMMPanther |
PTHR24015 |
FAMILY |
1e-87 |
193-365 |
| HMMPanther |
PTHR24015:SF191SUBFAMILY |
NOT |
1e-87 |
193-365 |
| Seg |
seg |
seg |
NA |
45-62 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
42 |
64 |
- Wolf-PSORT
Lj0g3v0064449.2 mito 7, chlo 3, nucl 2, plas 1, golg 1, cyto_nucl 1, cysk_nucl 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0064449.2 |
|