Miyakogusa Predicted Gene

Lj0g3v0064389.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SV62_LOTJA 379 85.1 85.1 (tr|I3SV62) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G78380.1 239 55.6 66.4 | Symbols: ATGSTU19, GST8, GSTU19 | glutathione S-transferase TAU 19 | chr1:29486659-29487819 REVERSE LENGTH=219

Medicago Medtr8g056940.1 330 74.7 78.3 | glutathione S-transferase, amine-terminal domain protein | HC | chr8:18874964-18873208 | 20130731

Soybean Glyma08g18640.1 258 57.8 69.7

LJGI gnl|LJGI|TC59587 1312 99.8 99.8 similar to UniRef100_P49332 Cluster: Probable glutathione S-transferase parC; n=1; Nicotiana tabacum|Rep: Probable glutathione S-transferase parC - Nicotiana tabacum (Common tobacco), partial (95%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0064389.1 length: 221 aa.

IPR004045 Glutathione S-transferase, N-terminal

method AccNumber shortName E-value location

Molecular Function GO:0005515 protein binding

ProfileScan PS50404 GST_NTER 21.551 4-83

IPR004046 Glutathione S-transferase, C-terminal

HMMPfam PF00043 GST_C 1.2e-14 113-194

IPR010987 Glutathione S-transferase, C-terminal-like

Gene3D G3DSA:1.20.1050.10 no description 1.6e-52 96-217

superfamily SSF47616 Glutathione 1.2e-46 77-219

IPR012336 Thioredoxin-like fold

Gene3D G3DSA:3.40.30.10 no description 8.3e-33 3-95

superfamily SSF52833 Thioredoxin-like 4.4e-24 4-109

IPR017933 Glutathione S-transferase/chloride channel, C-terminal

ProfileScan PS50405 GST_CTER 21.421 89-209

no_ID

Coil coil coiled-coil NA 119-140

HMMPanther PTHR11260 GLUTATHIONE 1.7e-107 5-215

HMMPanther PTHR11260:SF41 SUBFAMILY 1.7e-107 5-215

HMMPfam PF13417 GST_N_3 5.3e-15 11-78

Seg seg seg NA 26-36
122-143

Wolf-PSORT

Lj0g3v0064389.1 cyto 11.5, cyto_E.R. 6.5, cysk 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0064389.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SV62_LOTJA	379	85.1	85.1	(tr\|I3SV62) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G78380.1	239	55.6	66.4	\| Symbols: ATGSTU19, GST8, GSTU19 \| glutathione S-transferase TAU 19 \| chr1:29486659-29487819 REVERSE LENGTH=219
Medicago	Medtr8g056940.1	330	74.7	78.3	\| glutathione S-transferase, amine-terminal domain protein \| HC \| chr8:18874964-18873208 \| 20130731
Soybean	Glyma08g18640.1	258	57.8	69.7
LJGI	gnl\|LJGI\|TC59587	1312	99.8	99.8	similar to UniRef100_P49332 Cluster: Probable glutathione S-transferase parC; n=1; Nicotiana tabacum\|Rep: Probable glutathione S-transferase parC - Nicotiana tabacum (Common tobacco), partial (95%)

IPR004045	Glutathione S-transferase, N-terminal
Lj0g3v0064389.1				length: 221 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005515	protein binding
ProfileScan	PS50404	GST_NTER	21.551	4-83
IPR004046	Glutathione S-transferase, C-terminal
HMMPfam	PF00043	GST_C	1.2e-14	113-194
IPR010987	Glutathione S-transferase, C-terminal-like
Gene3D	G3DSA:1.20.1050.10	no description	1.6e-52	96-217
superfamily	SSF47616	Glutathione	1.2e-46	77-219
IPR012336	Thioredoxin-like fold
Gene3D	G3DSA:3.40.30.10	no description	8.3e-33	3-95
superfamily	SSF52833	Thioredoxin-like	4.4e-24	4-109
IPR017933	Glutathione S-transferase/chloride channel, C-terminal
ProfileScan	PS50405	GST_CTER	21.421	89-209
no_ID
Coil	coil	coiled-coil	NA	119-140
HMMPanther	PTHR11260	GLUTATHIONE	1.7e-107	5-215
HMMPanther	PTHR11260:SF41	SUBFAMILY	1.7e-107	5-215
HMMPfam	PF13417	GST_N_3	5.3e-15	11-78
Seg	seg	seg	NA	26-36 122-143