Miyakogusa Predicted Gene
- Lj0g3v0064269.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N0I9_SOYBN |
126 |
59.0 |
72.1 |
(tr|K7N0I9) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT5G23260.2 |
63.9 |
53.2 |
71.0 |
| Symbols: TT16, ABS, AGL32 | K-box region and MADS-box transcription factor family protein | chr5:7836442-7838340 FORWARD LENGTH=252 |
| Medicago |
Medtr1g038300.1 |
85.9 |
43.8 |
60.3 |
| MADS-box transcription factor | HC | chr1:14177669-14181324 | 20130731 |
| Soybean |
Glyma20g00400.1 |
110 |
54.1 |
63.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0064269.1 |
length: 122 aa. |
| IPR002487 |
Transcription factor, K-box |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003700 |
sequence-specific DNA binding transcription factor activity |
|
|
| Cellular Component |
GO:0005634 |
nucleus |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF01486 |
K-box |
2.8e-12 |
3-58 |
| ProfileScan |
PS51297 |
K_BOX |
11.022 |
1-62 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
6-59 |
| Seg |
seg |
seg |
NA |
89-107 |
- Wolf-PSORT
Lj0g3v0064269.1 cyto 5.5, nucl 4.5, cyto_E.R. 3.5, nucl_plas 3, mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0064269.1 |
|