Miyakogusa Predicted Gene

Lj0g3v0064139.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL A2Q1T1_MEDTR 89.7 49.0 58.3 (tr|A2Q1T1) Ubiquitin OS=Medicago truncatula GN=MtrDRAFT_AC149040g39v2 PE=4 SV=1

TAIR_pep --No_Hits--

Medicago Medtr6g043310.1 63.9 31.5 55.1 | hypothetical protein | HC | chr6:14988154-14988701 | 20130731

Soybean --No_Hits--

LJGI gnl|LJGI|TC73431 700 98.2 98.2 similar to UniRef100_A2Q1T1 Cluster: Ubiquitin; n=1; Medicago truncatula|Rep: Ubiquitin - Medicago truncatula (Barrel medic), partial (3%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0064139.1 length: 150 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 53-88

Seg seg seg NA 48-59
93-110

Wolf-PSORT

Lj0g3v0064139.1 nucl 5, cyto 4, mito 3, extr 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0064139.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	A2Q1T1_MEDTR	89.7	49.0	58.3	(tr\|A2Q1T1) Ubiquitin OS=Medicago truncatula GN=MtrDRAFT_AC149040g39v2 PE=4 SV=1
TAIR_pep	--No_Hits--
Medicago	Medtr6g043310.1	63.9	31.5	55.1	\| hypothetical protein \| HC \| chr6:14988154-14988701 \| 20130731
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC73431	700	98.2	98.2	similar to UniRef100_A2Q1T1 Cluster: Ubiquitin; n=1; Medicago truncatula\|Rep: Ubiquitin - Medicago truncatula (Barrel medic), partial (3%)

no_ID
Lj0g3v0064139.1				length: 150 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	53-88
Seg	seg	seg	NA	48-59 93-110