Miyakogusa Predicted Gene

Lj0g3v0063949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TAG4_SOYBN 462 85.5 93.3 (tr|C6TAG4) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT5G22100.1 333 69.1 83.9 | Symbols: | RNA cyclase family protein | chr5:7329015-7330718 FORWARD LENGTH=375
Medicago Medtr8g098715.1 412 78.3 87.0 | RNA 3-terminal phosphate cyclase-like protein, putative | HC | chr8:41207973-41212681 | 20130731
Soybean Glyma13g24750.2 461 85.5 93.3  
LJGI gnl|LJGI|TC68425 1247 100.0 100.0 similar to UniRef100_Q683I1 Cluster: RNA 3'-terminal phosphate cyclase-like protein; n=1; Arabidopsis thaliana|Rep: RNA 3'-terminal phosphate cyclase-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0063949.1 length: 258 aa.
IPR000228 RNA 3'-terminal phosphate cyclase
method AccNumber shortName E-value location
Biological Process GO:0006396 RNA processing    
HMMPanther PTHR11096 RNA 5.6e-97 11-255
IPR013791 RNA 3'-terminal phosphate cyclase, insert domain
HMMPfam PF05189 RTC_insert 1.1e-18 185-254
IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
Molecular Function GO:0003824 catalytic activity    
superfamily SSF55205 EPT/RTPC-like 7.2e-57 11-246
IPR016443 RNA 3'-terminal phosphate cyclase type 2
Cellular Component GO:0005730 nucleolus    
Biological Process GO:0042254 ribosome biogenesis    
HMMTigr TIGR03400 18S_RNA_Rcl1p: 6.4e-101 8-255
IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site
PatternScan PS01287 RTC NA 158-168
IPR023797 RNA 3'-terminal phosphate cyclase domain
Gene3D G3DSA:3.65.10.20 no description 3.4e-51 10-190
HMMPfam PF01137 RTC 8.7e-54 8-182
no_ID  
BlastProDom PD397608 Q683I1_ARATH_Q683I1; 7e-18 194-253
Wolf-PSORT
Lj0g3v0063949.1	mito 7.5, chlo_mito 7, chlo 5.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0063949.1