Miyakogusa Predicted Gene
- Lj0g3v0063729.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SB11_LOTJA |
305 |
98.6 |
98.6 |
(tr|I3SB11) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G41700.5 |
293 |
93.2 |
98.0 |
| Symbols: UBC8 | ubiquitin conjugating enzyme 8 | chr5:16676072-16677223 FORWARD LENGTH=148 |
| Medicago |
Medtr8g071040.2 |
297 |
95.3 |
97.3 |
| ubiquitin-conjugating enzyme E2 | HC | chr8:30133617-30129769 | 20130731 |
| Soybean |
Glyma08g35600.1 |
296 |
95.9 |
97.3 |
|
| LJGI |
gnl|LJGI|TC60054 |
884 |
99.8 |
99.8 |
homologue to UniRef100_A5AI12 Cluster: Ubiquitin carrier protein; n=1; Vitis vinifera|Rep: Ubiquitin carrier protein - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0063729.1 |
length: 148 aa. |
| IPR000608 |
Ubiquitin-conjugating enzyme, E2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016881 |
acid-amino acid ligase activity |
|
|
| HMMPfam |
PF00179 |
UQ_con |
4.2e-52 |
5-141 |
| ProfileScan |
PS50127 |
UBIQUITIN_CONJUGAT_2 |
47.830 |
4-136 |
| IPR016135 |
Ubiquitin-conjugating enzyme/RWD-like |
| Gene3D |
G3DSA:3.10.110.10 |
no description |
9.9e-81 |
1-147 |
| superfamily |
SSF54495 |
UBC-like |
9.9e-65 |
1-148 |
| IPR023313 |
Ubiquitin-conjugating enzyme, active site |
| PatternScan |
PS00183 |
UBIQUITIN_CONJUGAT_1 |
NA |
74-89 |
| no_ID |
|
| HMMPanther |
PTHR24068 |
FAMILY |
4.5e-115 |
1-147 |
| HMMSmart |
SM00212 |
Ubiquitin-conjugating |
1.4e-77 |
4-147 |
- Wolf-PSORT
Lj0g3v0063729.1 nucl 4.5, mito 4, cyto_nucl 4, cyto 2.5, chlo_mito 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0063729.1 |
|