Miyakogusa Predicted Gene

Lj0g3v0062699.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JYS9_SOYBN 1692 81.3 87.0 (tr|I1JYS9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G53430.1 1283 62.7 74.2 | Symbols: SDG29, SET29, ATX5 | SET domain group 29 | chr5:21677623-21683166 FORWARD LENGTH=1043
Medicago Medtr3g091310.1 1615 77.5 83.2 | histone-lysine N-methyltransferase ATX3 | HC | chr3:41534178-41524903 | 20130731
Soybean Glyma04g41500.1 1679 80.6 86.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0062699.1 length: 1015 aa.
IPR000313 PWWP
method AccNumber shortName E-value location
HMMPfam PF00855 PWWP 6e-05 244-324
ProfileScan PS50812 PWWP 9.152 246-315
IPR001214 SET domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF00856 SET 3e-15 934-1011
HMMSmart SM00317 SET 6.4e-12 923-1014
ProfileScan PS50280 SET 24.754 914-1015
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 0.62 439-491
633-680
744-800
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 0.015 432-499
616-697
728-790
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.6e-08 435-493
632-680
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 634-679
427-490
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 1e-08 439-492
ProfileScan PS50016 ZF_PHD_2 8.920 437-493
631-682
IPR025780 Histone-lysine N-methyltransferase ATX
ProfileScan PS51566 SAM_MT43_TRX_MLL 408.021 3-1015
no_ID  
Gene3D G3DSA:2.170.270.10 no description 3e-28 913-1014
Gene3D G3DSA:2.30.30.160 no description 3.1e-18 241-350
HMMPanther PTHR13793 PHD 1.6e-269 632-1015
HMMPanther PTHR13793:SF5 TRITHORAX 1.6e-269 632-1015
HMMPfam PF13831 PHD_2 5.4e-11 646-680
HMMPfam PF13832 zf-HC5HC2H_2 2.1e-28 687-799
Seg seg seg NA 129-142
superfamily SSF63748 Tudor/PWWP/MBT 9.9e-19 236-351
superfamily SSF82199 SET 8.8e-33 886-1015
Wolf-PSORT
Lj0g3v0062699.1	nucl 6, chlo 4, mito 3, cysk_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0062699.1