Miyakogusa Predicted Gene
- Lj0g3v0061669.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T7D3_LOTJA |
342 |
94.5 |
94.5 |
(tr|I3T7D3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G46960.1 |
94.7 |
40.1 |
54.9 |
| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr5:19062220-19062744 REVERSE LENGTH=174 |
| Medicago |
Medtr4g099010.1 |
211 |
67.5 |
81.7 |
| plant invertase/pectin methylesterase inhibitor | HC | chr4:40925411-40924521 | 20130731 |
| Soybean |
Glyma17g16160.1 |
232 |
68.5 |
79.3 |
|
| LJGI |
gnl|LJGI|GO030493 |
1086 |
99.8 |
99.8 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0061669.1 |
length: 183 aa. |
| IPR006501 |
Pectinesterase inhibitor |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004857 |
enzyme inhibitor activity |
|
|
| Molecular Function |
GO:0030599 |
pectinesterase activity |
|
|
| Gene3D |
G3DSA:1.20.140.40 |
no description |
2.7e-30 |
23-181 |
| HMMPfam |
PF04043 |
PMEI |
2.1e-25 |
22-175 |
| HMMSmart |
SM00856 |
Plant |
5.1e-23 |
21-176 |
| HMMTigr |
TIGR01614 |
PME_inhib: |
2.9e-34 |
1-180 |
| superfamily |
SSF101148 |
Plant |
1.5e-29 |
22-180 |
| no_ID |
|
| ProfileScan |
PS51257 |
PROKAR_LIPOPROTEIN |
5.000 |
1-30 |
| Seg |
seg |
seg |
NA |
7-16 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
4 |
26 |
- Wolf-PSORT
Lj0g3v0061669.1 extr 10, vacu 2, chlo 1, plas 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0061669.1 |
|