Miyakogusa Predicted Gene

Lj0g3v0061149.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D2IU94_MEDTR 833 70.9 80.9 (tr|D2IU94) LATD/NIP OS=Medicago truncatula GN=MTR_1g009200 PE=2 SV=1
TAIR_pep AT1G52190.1 554 49.6 65.0 | Symbols: | Major facilitator superfamily protein | chr1:19434671-19438673 FORWARD LENGTH=607
Medicago Medtr1g009200.1 833 70.9 80.9 | peptide/nitrate transporter plant | HC | chr1:1220841-1224095 | 20130731
Soybean Glyma14g19010.1 814 68.5 79.6  
LJGI gnl|LJGI|GO025586 1203 99.7 99.7 weakly similar to UniRef100_A7P596 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0061149.1 length: 583 aa.
IPR000109 Proton-dependent oligopeptide transporter family
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR11654 OLIGOPEPTIDE 5e-255 25-560
HMMPfam PF00854 PTR2 1.8e-66 97-493
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 3.8e-17 22-573
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 5.2e-08 42-228
HMMPanther PTHR11654:SF58 OS04G0491200 5e-255 25-560
Seg seg seg NA 15-21
138-151
500-512
Putative transmembrane regions
  From To
TM segments
SOSUI		 89 111
137 159
185 207
210 232
321 343
370 392
407 428
440 462
484 506
534 555
Wolf-PSORT
Lj0g3v0061149.1	plas 6, vacu 4, golg 3, nucl_plas 3, cysk_plas 3, mito_plas 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0061149.1