Miyakogusa Predicted Gene

Lj0g3v0059679.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q8H1A3_PEA 1238 88.3 94.6 (tr|Q8H1A3) Mini-chromosome maintenance protein MCM6 OS=Pisum sativum GN=mcm6 PE=2 SV=2
TAIR_pep AT5G44635.1 1140 80.7 90.6 | Symbols: MCM6 | minichromosome maintenance (MCM2/3/5) family protein | chr5:18006431-18010542 REVERSE LENGTH=831
Medicago Medtr8g090000.1 1234 88.0 94.3 | minichromosome maintenance (MCM2/3/5) family protein | HC | chr8:37650442-37644876 | 20130731
Soybean Glyma09g05240.1 1215 85.8 94.0  
LJGI gnl|LJGI|TC82040 1283 100.0 100.0 similar to UniRef100_Q8H1A3 Cluster: Mini-chromosome maintenance protein MCM6; n=1; Pisum sativum|Rep: Mini-chromosome maintenance protein MCM6 - Pisum sativum (Garden pea), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0059679.1 length: 750 aa.
IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
FPrintScan PR01657 MCMFAMILY 7.6e-33 383-398
443-457
471-484
495-507
522-530
HMMPfam PF00493 MCM 1.4e-134 330-652
HMMSmart SM00350 minichromosome 3.9e-262 114-653
ProfileScan PS50051 MCM_2 89.245 342-548
IPR008049 DNA replication licensing factor Mcm6
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003678 DNA helicase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006270 DNA replication initiation    
Cellular Component GO:0042555 MCM complex    
FPrintScan PR01662 MCMPROTEIN6 2.4e-24 73-85
115-127
165-182
218-229
277-298
HMMPanther PTHR11630:SF43 DNA 0 10-701
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 4.1e-23 196-247
superfamily SSF50249 Nucleic 1.1e-63 18-248
IPR018525 Mini-chromosome maintenance, conserved site
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
PatternScan PS00847 MCM_1 NA 451-459
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3e-42 346-653
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.5e-38 352-531
HMMPanther PTHR11630 DNA 0 10-701
Seg seg seg NA 667-706
Wolf-PSORT
Lj0g3v0059679.1	cyto 6, nucl 4, chlo 1, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0059679.1