Miyakogusa Predicted Gene
- Lj0g3v0058359.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
R0FN93_9BRAS |
122 |
100.0 |
100.0 |
(tr|R0FN93) Uncharacterized protein OS=Capsella rubella GN=CARUB_v10017152mg PE=4 SV=1 |
TAIR_pep |
AT3G61650.1 |
122 |
100.0 |
100.0 |
| Symbols: TUBG1 | gamma-tubulin | chr3:22812601-22815011 REVERSE LENGTH=474 |
Medicago |
Medtr7g117050.1 |
120 |
98.2 |
100.0 |
| tubulin | HC | chr7:48332494-48327570 | 20130731 |
Soybean |
Glyma19g44260.2 |
110 |
91.2 |
96.5 |
|
LJGI |
gnl|LJGI|TC79627 |
339 |
100.0 |
100.0 |
homologue to UniRef100_Q8GZT0 Cluster: Gamma-tubulin; n=1; Lupinus albus|Rep: Gamma-tubulin - Lupinus albus (White lupin), partial (53%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0058359.1 |
length: 57 aa. |
IPR000217 |
Tubulin |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0005525 |
GTP binding |
|
|
Cellular Component |
GO:0005874 |
microtubule |
|
|
Biological Process |
GO:0007017 |
microtubule-based process |
|
|
HMMPanther |
PTHR11588 |
TUBULIN |
1.7e-19 |
1-57 |
IPR008280 |
Tubulin/FtsZ, C-terminal |
Molecular Function |
GO:0003924 |
GTPase activity |
|
|
Molecular Function |
GO:0005525 |
GTP binding |
|
|
Biological Process |
GO:0006184 |
GTP catabolic process |
|
|
Cellular Component |
GO:0043234 |
protein complex |
|
|
Biological Process |
GO:0051258 |
protein polymerization |
|
|
superfamily |
SSF55307 |
Tubulin |
2.3e-11 |
1-57 |
IPR023123 |
Tubulin, C-terminal |
Gene3D |
G3DSA:1.10.287.600 |
no description |
7.8e-07 |
8-57 |
no_ID |
|
HMMPanther |
PTHR11588:SF7 |
TUBULIN |
1.7e-19 |
1-57 |
- Wolf-PSORT
Lj0g3v0058359.1 nucl 8.5, cyto_nucl 5.5, chlo 2, mito 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0058359.1 |
|