Miyakogusa Predicted Gene

Lj0g3v0057669.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KS22_SOYBN 240 63.6 69.4 (tr|I1KS22) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G27385.1 190 76.4 83.5 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:9511129-9512820 REVERSE LENGTH=202
Medicago Medtr3g085280.1 227 59.2 67.5 | DUF493 family protein | HC | chr3:38539441-38536068 | 20130731
Soybean Glyma08g10990.2 240 63.6 69.4  
LJGI gnl|LJGI|TC61162 258 86.2 86.2 homologue to UniRef100_A7QP57 Cluster: Chromosome chr1 scaffold_136, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_136, whole genome shotgun sequence - Vitis vinifera (Grape), partial (72%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0057669.1 length: 199 aa.
IPR007454 Uncharacterised protein family UPF0250
method AccNumber shortName E-value location
HMMPfam PF04359 DUF493 1.4e-18 116-199
IPR027471 YbeD-like domain
Gene3D G3DSA:3.30.70.1460 no description 1e-13 112-199
superfamily SSF117991 YbeD-like 3.3e-13 109-199
no_ID  
Seg seg seg NA 68-79
Wolf-PSORT
Lj0g3v0057669.1	chlo 10, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0057669.1 Not targeted -18.091 -0.221 -3.252 10.56% -14.618