Miyakogusa Predicted Gene

Lj0g3v0057309.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1LBB9_SOYBN 295 80.6 92.9 (tr|I1LBB9) Lipoxygenase OS=Glycine max PE=3 SV=1

TAIR_pep AT1G55020.1 254 68.2 85.9 | Symbols: LOX1, ATLOX1 | lipoxygenase 1 | chr1:20525798-20530143 FORWARD LENGTH=859

Medicago Medtr1g083020.1 288 80.0 90.6 | linoleate 9S-lipoxygenase-like protein | HC | chr1:36920655-36927114 | 20130731

Soybean Glyma10g29490.1 295 80.6 92.9

LJGI gnl|LJGI|TC65137 1019 100.0 100.0 similar to UniRef100_Q93YI8 Cluster: Lipoxygenase; n=1; Corylus avellana|Rep: Lipoxygenase - Corylus avellana (European hazel), partial (21%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0057309.1 length: 170 aa.

IPR000907 Lipoxygenase

method AccNumber shortName E-value location

Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Molecular Function GO:0046872 metal ion binding

Biological Process GO:0055114 oxidation-reduction process

HMMPanther PTHR11771 LIPOXYGENASE 2.1e-85 1-170

IPR013819 Lipoxygenase, C-terminal

Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Molecular Function GO:0046872 metal ion binding

Biological Process GO:0055114 oxidation-reduction process

HMMPfam PF00305 Lipoxygenase 3.8e-66 1-154

ProfileScan PS51393 LIPOXYGENASE_3 81.252 1-170

superfamily SSF48484 Lipoxigenase 5.6e-69 1-170

no_ID

Gene3D G3DSA:1.20.245.10 no description 7.6e-59 1-170

HMMPanther PTHR11771:SF2 LIPOXYGENASE 2.1e-85 1-170

Putative transmembrane regions

From To

TM segments
SOSUI 6 28

Wolf-PSORT

Lj0g3v0057309.1 cyto 12, nucl 1, extr 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0057309.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1LBB9_SOYBN	295	80.6	92.9	(tr\|I1LBB9) Lipoxygenase OS=Glycine max PE=3 SV=1
TAIR_pep	AT1G55020.1	254	68.2	85.9	\| Symbols: LOX1, ATLOX1 \| lipoxygenase 1 \| chr1:20525798-20530143 FORWARD LENGTH=859
Medicago	Medtr1g083020.1	288	80.0	90.6	\| linoleate 9S-lipoxygenase-like protein \| HC \| chr1:36920655-36927114 \| 20130731
Soybean	Glyma10g29490.1	295	80.6	92.9
LJGI	gnl\|LJGI\|TC65137	1019	100.0	100.0	similar to UniRef100_Q93YI8 Cluster: Lipoxygenase; n=1; Corylus avellana\|Rep: Lipoxygenase - Corylus avellana (European hazel), partial (21%)

IPR000907	Lipoxygenase
Lj0g3v0057309.1				length: 170 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Molecular Function	GO:0046872	metal ion binding
Biological Process	GO:0055114	oxidation-reduction process
HMMPanther	PTHR11771	LIPOXYGENASE	2.1e-85	1-170
IPR013819	Lipoxygenase, C-terminal
Molecular Function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Molecular Function	GO:0046872	metal ion binding
Biological Process	GO:0055114	oxidation-reduction process
HMMPfam	PF00305	Lipoxygenase	3.8e-66	1-154
ProfileScan	PS51393	LIPOXYGENASE_3	81.252	1-170
superfamily	SSF48484	Lipoxigenase	5.6e-69	1-170
no_ID
Gene3D	G3DSA:1.20.245.10	no description	7.6e-59	1-170
HMMPanther	PTHR11771:SF2	LIPOXYGENASE	2.1e-85	1-170