Miyakogusa Predicted Gene
- Lj0g3v0056219.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L889_SOYBN |
525 |
84.6 |
92.5 |
(tr|I1L889) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G38840.1 |
457 |
71.3 |
85.3 |
| Symbols: | Guanylate-binding family protein | chr2:16227329-16232115 FORWARD LENGTH=602 |
| Medicago |
Medtr1g070940.1 |
504 |
80.9 |
90.1 |
| guanylate-binding family protein | HC | chr1:31412653-31405961 | 20130731 |
| Soybean |
Glyma10g03660.1 |
524 |
84.6 |
92.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0056219.1 |
length: 309 aa. |
| IPR003191 |
Guanylate-binding protein, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003924 |
GTPase activity |
|
|
| Molecular Function |
GO:0005525 |
GTP binding |
|
|
| HMMPfam |
PF02841 |
GBP_C |
3.4e-09 |
32-161 |
| superfamily |
SSF48340 |
Interferon-induced |
4.6e-40 |
31-253 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1000.10 |
no description |
1.4e-13 |
32-160 |
| HMMPanther |
PTHR10751 |
GUANYLATE |
1.7e-22 |
1-163 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
228 |
250 |
| 272 |
294 |
- Wolf-PSORT
Lj0g3v0056219.1 plas 4, vacu 4, E.R. 3, nucl 1, cyto 1, golg 1, cyto_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0056219.1 |
|