Miyakogusa Predicted Gene

Lj0g3v0056099.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KRB1_SOYBN 561 63.8 76.2 (tr|I1KRB1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G30700.1 389 47.8 64.7 | Symbols: | FAD-binding Berberine family protein | chr1:10892623-10894437 FORWARD LENGTH=527
Medicago Medtr4g094498.1 585 66.0 76.0 | reticuline oxidase-like protein | HC | chr4:38090014-38092211 | 20130731
Soybean Glyma08g11890.1 572 66.7 76.9  
LJGI gnl|LJGI|TC57865 79.8 83.6 83.6 similar to UniRef100_A7Q4U0 Cluster: Chromosome chr10 scaffold_50, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_50, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0056099.1 length: 462 aa.
IPR006094 FAD linked oxidase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01565 FAD_binding_4 2.5e-27 74-212
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 17.041 70-245
superfamily SSF56176 FAD-binding 6.3e-45 53-246
IPR016167 FAD-binding, type 2, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.43.10 no description 9.2e-05 73-127
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Gene3D G3DSA:3.30.465.10 no description 4.2e-10 134-246
no_ID  
HMMPanther PTHR32448 FAMILY 3.7e-225 4-423
Seg seg seg NA 174-185
221-237
243-255
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 20
Wolf-PSORT
Lj0g3v0056099.1	chlo 4, vacu 3, E.R. 3, E.R._vacu 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0056099.1