Miyakogusa Predicted Gene

Lj0g3v0056049.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N7R8_SOYBN 657 72.3 81.2 (tr|I1N7R8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G06540.1 328 39.3 55.8 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:1999181-2001049 REVERSE LENGTH=622
Medicago Medtr7g033400.1 698 75.9 84.8 | PPR containing protein | HC | chr7:12012362-12010888 | 20130731
Soybean Glyma19g25830.1 645 72.0 81.1  
LJGI gnl|LJGI|TC71210 52.0 89.1 89.1 weakly similar to UniRef100_A7NSL4 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0056049.1 length: 480 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.096 172-197
201-230
239-265
374-398
HMMPfam PF13041 PPR_2 1.6e-13 299-348
HMMTigr TIGR00756 PPR: 0.0024 201-233
301-332
337-370
ProfileScan PS51375 PPR 7.476 198-232
167-197
233-267
299-333
268-298
335-370
371-401
437-471
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00051 399-459
no_ID  
HMMPanther PTHR24015 FAMILY 1.1e-168 44-478
HMMPanther PTHR24015:SF61 PGR3 1.1e-168 44-478
Seg seg seg NA 2-29
68-82
Wolf-PSORT
Lj0g3v0056049.1	chlo 7, mito 6.5, cyto_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0056049.1