Miyakogusa Predicted Gene

Lj0g3v0055519.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JSC9_SOYBN 707 82.9 89.4 (tr|I1JSC9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G06980.1 604 66.7 82.6 | Symbols: | DEA(D/H)-box RNA helicase family protein | chr3:2201531-2204662 FORWARD LENGTH=781
Medicago Medtr3g118120.1 682 79.2 88.6 | DEAD-box ATP-dependent RNA helicase | HC | chr3:55283621-55286718 | 20130731
Soybean Glyma04g00390.1 707 82.9 89.4  
LJGI gnl|LJGI|TC76431 513 99.6 99.6 similar to UniRef100_A7NW17 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0055519.1 length: 424 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 4.2e-18 307-381
HMMSmart SM00490 helicase 3.4e-16 292-382
ProfileScan PS51194 HELICASE_CTER 18.605 264-424
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 2.6e-32 42-215
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 2.4e-33 36-244
ProfileScan PS51192 HELICASE_ATP_BIND_1 23.945 48-229
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 9.961 17-45
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6.2e-52 93-406
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.5e-32 15-239
264-412
HMMPanther PTHR24031 FAMILY 2.4e-175 14-413
HMMPanther PTHR24031:SF35 DEAD/DEAH 2.4e-175 14-413
Seg seg seg NA 372-386
Wolf-PSORT
Lj0g3v0055519.1	cyto 9, chlo 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0055519.1