Miyakogusa Predicted Gene

Lj0g3v0055339.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SYM4_LOTJA 385 88.6 88.6 (tr|I3SYM4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G43030.1 333 75.5 84.1 | Symbols: | Ribosomal protein L3 family protein | chr2:17894898-17895713 FORWARD LENGTH=271
Medicago Medtr3g118210.1 355 80.0 85.9 | 50S ribosomal protein L3P | HC | chr3:55341330-55342663 | 20130731
Soybean Glyma04g00360.1 366 81.8 87.7  
LJGI gnl|LJGI|TC62800 1314 100.0 100.0 similar to UniRef100_Q9SKX4 Cluster: 50S ribosomal protein L3-1, chloroplast precursor; n=2; Arabidopsis thaliana|Rep: 50S ribosomal protein L3-1, chloroplast precursor - Arabidopsis thaliana (Mouse-ear cress), partial (83%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0055339.1 length: 220 aa.
IPR000597 Ribosomal protein L3
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF00297 Ribosomal_L3 1.5e-43 22-207
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 2.8e-70 5-216
IPR019926 Ribosomal protein L3, conserved site
PatternScan PS00474 RIBOSOMAL_L3 NA 106-129
IPR019927 Ribosomal protein L3, bacterial/organelle-type
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR11229 50S 3.6e-97 1-216
HMMTigr TIGR03625 L3_bact: 3.4e-74 6-207
no_ID  
Gene3D G3DSA:2.40.30.10 no description 0.00021 162-204
Gene3D G3DSA:4.10.960.10 no description 9.3e-31 80-161
Seg seg seg NA 23-30
173-188
Wolf-PSORT
Lj0g3v0055339.1	cyto 12, chlo 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0055339.1