Miyakogusa Predicted Gene

Lj0g3v0054689.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SQI6_LOTJA 656 94.6 94.6 (tr|I3SQI6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G40410.2 489 69.0 81.3 | Symbols: | Staphylococcal nuclease homologue | chr2:16873509-16875215 FORWARD LENGTH=332
Medicago Medtr5g083730.1 538 78.3 84.6 | Ca(2+)-dependent nuclease-like protein | HC | chr5:36117268-36120058 | 20130731
Soybean Glyma02g42840.1 582 82.3 88.9  
LJGI gnl|LJGI|TC63501 1998 100.0 100.0 similar to UniRef100_A1KYZ0 Cluster: Ca(2+)-dependent DNase; n=1; Populus tomentosa|Rep: Ca(2+)-dependent DNase - Populus tomentosa (Chinese white poplar), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0054689.1 length: 335 aa.
IPR002071 Thermonuclease active site
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004518 nuclease activity    
PatternScan PS01284 TNASE_2 NA 263-273
IPR006021 Staphylococcal nuclease (SNase-like)
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:2.40.50.90 no description 6.4e-34 219-325
HMMPfam PF00565 SNase 7.3e-27 223-317
HMMSmart SM00318 Staphylococcal 1.7e-30 200-318
ProfileScan PS50830 TNASE_3 31.835 142-318
IPR016071 Staphylococcal nuclease (SNase-like), OB-fold
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0016788 hydrolase activity, acting on ester bonds    
superfamily SSF50199 Staphylococcal 6.6e-30 135-325
no_ID  
HMMPanther PTHR31445 FAMILY 8.5e-135 4-335
Seg seg seg NA 178-195
Wolf-PSORT
Lj0g3v0054689.1	chlo 5, cyto 3, mito 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0054689.1