Miyakogusa Predicted Gene

Lj0g3v0054619.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JIB8_SOYBN 672 80.0 87.4 (tr|I1JIB8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G56200.1 410 49.4 67.7 | Symbols: | Transmembrane amino acid transporter family protein | chr3:20850087-20851779 FORWARD LENGTH=435
Medicago Medtr5g083760.1 662 74.5 83.6 | transmembrane amino acid transporter family protein | HC | chr5:36131798-36134727 | 20130731
Soybean Glyma14g05910.1 649 77.6 84.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0054619.1 length: 438 aa.
IPR013057 Amino acid transporter, transmembrane
method AccNumber shortName E-value location
HMMPfam PF01490 Aa_trans 8.7e-54 25-411
no_ID  
HMMPanther PTHR22950 AMINO 1.3e-80 21-432
Seg seg seg NA 90-104
109-123
Putative transmembrane regions
  From To
TM segments
SOSUI		 26 48
54 76
103 125
150 171
181 203
218 240
263 285
307 329
354 376
383 405
410 432
Wolf-PSORT
Lj0g3v0054619.1	plas 6, vacu 4, golg 3, nucl_plas 3, cysk_plas 3, mito_plas 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0054619.1 Not targeted -46.947 -1.382 -3.193 68.59% -42.371